The HHMI Spyglass tutorial Spyglass # Spyglass is a framework for reproducible and shareable neuroscience research produced by Loren Frank’s lab at the University of California, San Francisco. Check out our blog post about the release of their preprint to read more about the methods. This post focuses on the complex data storage needed for the project, which can be difficult to set up locally or at scale in the cloud. In particular, the analysis needed a MySQL database for reproducibility. ...| Blog posts | 2i2c
Photo courtesy of Dr Debanjana Das What is Project Pythia? # Project Pythia is the education working group for Pangeo, a community platform for Big Data geoscience in which 2i2c operates a cloud hub. The core aim of Project Pythia is to spearhead the creation and curation of community-driven, open-source documentation, in the form of “cookbooks”, to enable the adoption of open, scalable and reproducible workflows for geoscientists. What did 2i2c do? # Jenny, James and Angus from the 2i2c ...| Blog posts | 2i2c
Thanks to Arnim Bleier, Jenny Wong, Georgiana Elena, Damián Avila, Jim Colliander and James Munroe for contributing to this blog post mybinder.org is a very popular service that allows end users to specify and share the environment (languages, packages, etc) required for their notebooks to run correctly by placing configuration files they are already familiar with (like requirements.txt or environment.yml) along with their notebooks. While not without its own set of challenges, this is extre...| Blog posts | 2i2c
If you’re interested in supporting mybinder.org with cloud resources, financial resources, or human resources, please see the Support Binder page for how you can help. tl;dr: The 2i2c team is joining the mybinder.| 2i2c