Papers AStarix: Fast and Optimal Sequence-to-Graph Alignment Fast and Optimal Sequence-to-Graph Alignment Guided by Seeds AStarix is a method for aligning sequences (reads) to graphs: InputA reference sequence or graph Alignment costs \((\Delta_{match}, \Delta_{subst}, \Delta_{del}, \Delta_{ins})\) for a match, substitution, insertion and deletion Sequence(s) to align OutputAn optimal alignment of each input sequenceThe input is a reference graph (automaton really) \(G_r = (V_r, E_r)\) with e...
